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External Internet References

Reference	Location
href	install_unix#System Requirements.sqlite3
http://bradbell.github.io/omhelp	dismod_at#Old Documentation
http://eigen.tuxfamily.org	install_unix#Special Requirements.eigen
http://faculty.cse.tamu.edu/davis/suitesparse.html	install_unix#System Requirements.suitesparse
http://gnuwin32.sourceforge.net/packages/gsl.htm	install_unix#System Requirements.gsl
http://sqlitebrowser.org/	get_started#get_started.db
http://sqlitebrowser.org/	user_example#example.db
http://www.cmake.org/	install_unix#System Requirements.cmake
http://www.coin-or.org/CppAD/	install_unix#Special Requirements.cppad
http://www.coin-or.org/Ipopt/documentation/	option_table#Optimize Fixed Only
http://www.freedesktop.org/wiki/Software/pkg-config/	install_unix#System Requirements.pkg-config
http://www.python.org/	install_unix#System Requirements.python3
http://www.sqlite.org/changes.html	install_unix#System Requirements.sqlite3
http://www.sqlite.org/sqlite/	bnd_mulcov_command#database
http://www.sqlite.org/sqlite/	data_density_command#database
http://www.sqlite.org/sqlite/	depend_command#database
http://www.sqlite.org/sqlite/	fit_command#database
http://www.sqlite.org/sqlite/	hold_out_command#database
http://www.sqlite.org/sqlite/	init_command#database
http://www.sqlite.org/sqlite/	predict_command#database
http://www.sqlite.org/sqlite/	sample_command#database
http://www.sqlite.org/sqlite/	set_command#database
http://www.sqlite.org/sqlite/	simulate_command#database
https://bradbell.github.io/at_cascade/doc/rst/at_cascade.html	dock_dismod_at.sh#Building Images.at_cascade.image
https://bradbell.github.io/cppad_mixed	install_unix#Special Requirements.cppad_mixed
https://bradbell.github.io/cppad_mixed/doc/theory.htm	user_hes_fixed_math.py#Reference
https://bradbell.github.io/cppad_mixed/doc/theory.htm	user_hes_random.py#Reference
https://bradbell.github.io/dismod_at/doc/index.html	whats_new_2017#mm-dd.12-10
https://cmake.org/pipermail/cmake/2019-September/069977.html	whats_new_2019#mm-dd.09-23
https://coin-or.github.io/CppAD/doc/speed_cppadcg.htm	wish_list#Speed
https://coin-or.github.io/Ipopt/OPTIONS.html	fit_command#Ipopt Options
https://dismod-at.readthedocs.io	dismod_at#Current Documentation
https://dismod-at.readthedocs.io	math_abstract
https://dismod-at.readthedocs.io	math_ode
https://dismod-at.readthedocs.io	censor_density
https://dismod-at.readthedocs.io	prevalence_ode
https://dismod-at.readthedocs.io	install
https://dismod-at.readthedocs.io	dock_dismod_at.sh
https://dismod-at.readthedocs.io	install_unix
https://dismod-at.readthedocs.io	get_started
https://dismod-at.readthedocs.io	get_started_db.py
https://dismod-at.readthedocs.io	user_example
https://dismod-at.readthedocs.io	user_age_avg_split.py
https://dismod-at.readthedocs.io	user_bilevel_random.py
https://dismod-at.readthedocs.io	user_bnd_mulcov.py
https://dismod-at.readthedocs.io	user_cascade.py
https://dismod-at.readthedocs.io	user_censor.py
https://dismod-at.readthedocs.io	user_change_grid.py
https://dismod-at.readthedocs.io	user_compress.py
https://dismod-at.readthedocs.io	user_const_random.py
https://dismod-at.readthedocs.io	user_const_value.py
https://dismod-at.readthedocs.io	user_continue_fit.py
https://dismod-at.readthedocs.io	user_covid_19.py
https://dismod-at.readthedocs.io	user_csv2db.py
https://dismod-at.readthedocs.io	user_data_density.py
https://dismod-at.readthedocs.io	user_data_sim.py
https://dismod-at.readthedocs.io	user_diabetes.py
https://dismod-at.readthedocs.io	user_diff_constraint.py
https://dismod-at.readthedocs.io	user_fit_fixed_both.py
https://dismod-at.readthedocs.io	user_fit_meas_noise.py
https://dismod-at.readthedocs.io	user_fit_random.py
https://dismod-at.readthedocs.io	user_fit_sim.py
https://dismod-at.readthedocs.io	user_group_mulcov.py
https://dismod-at.readthedocs.io	user_hes_fixed_math.py
https://dismod-at.readthedocs.io	user_hes_random.py
https://dismod-at.readthedocs.io	user_hold_out_1.py
https://dismod-at.readthedocs.io	user_hold_out_2.py
https://dismod-at.readthedocs.io	user_ill_condition.py
https://dismod-at.readthedocs.io	user_jump_at_age.py
https://dismod-at.readthedocs.io	user_lasso_covariate.py
https://dismod-at.readthedocs.io	user_mulstd.py
https://dismod-at.readthedocs.io	user_no_children.py
https://dismod-at.readthedocs.io	user_one_function.py
https://dismod-at.readthedocs.io	user_plot_curve.py
https://dismod-at.readthedocs.io	user_plot_data_fit.py
https://dismod-at.readthedocs.io	user_plot_rate_fit.py
https://dismod-at.readthedocs.io	user_predict_fit.py
https://dismod-at.readthedocs.io	user_predict_mulcov.py
https://dismod-at.readthedocs.io	user_re_scale.py
https://dismod-at.readthedocs.io	user_residual.py
https://dismod-at.readthedocs.io	user_sample_asy.py
https://dismod-at.readthedocs.io	user_sample_asy_sim.py
https://dismod-at.readthedocs.io	user_sample_sim.py
https://dismod-at.readthedocs.io	user_sim_log.py
https://dismod-at.readthedocs.io	user_speed.py
https://dismod-at.readthedocs.io	user_subgroup_mulcov.py
https://dismod-at.readthedocs.io	user_sum_residual.py
https://dismod-at.readthedocs.io	user_system_command_prc.py
https://dismod-at.readthedocs.io	user_trace_init.py
https://dismod-at.readthedocs.io	user_trapezoidal.py
https://dismod-at.readthedocs.io	user_warm_start.py
https://dismod-at.readthedocs.io	user_zsum_child_rate.py
https://dismod-at.readthedocs.io	user_zsum_mulcov_meas.py
https://dismod-at.readthedocs.io	user_zsum_mulcov_rate.py
https://dismod-at.readthedocs.io	database
https://dismod-at.readthedocs.io	input
https://dismod-at.readthedocs.io	age_table
https://dismod-at.readthedocs.io	age_table.py
https://dismod-at.readthedocs.io	avgint_table
https://dismod-at.readthedocs.io	avgint_table.py
https://dismod-at.readthedocs.io	covariate_table
https://dismod-at.readthedocs.io	covariate_table.py
https://dismod-at.readthedocs.io	data_table
https://dismod-at.readthedocs.io	data_table.py
https://dismod-at.readthedocs.io	density_table
https://dismod-at.readthedocs.io	density_table.py
https://dismod-at.readthedocs.io	integrand_table
https://dismod-at.readthedocs.io	integrand_table.py
https://dismod-at.readthedocs.io	mulcov_table
https://dismod-at.readthedocs.io	mulcov_table.py
https://dismod-at.readthedocs.io	node_table
https://dismod-at.readthedocs.io	node_table.py
https://dismod-at.readthedocs.io	nslist_pair_table
https://dismod-at.readthedocs.io	nslist_pair_table.py
https://dismod-at.readthedocs.io	nslist_table
https://dismod-at.readthedocs.io	nslist_table.py
https://dismod-at.readthedocs.io	option_table
https://dismod-at.readthedocs.io	option_default
https://dismod-at.readthedocs.io	option_table.py
https://dismod-at.readthedocs.io	prior_table
https://dismod-at.readthedocs.io	prior_table.py
https://dismod-at.readthedocs.io	rate_table
https://dismod-at.readthedocs.io	rate_table.py
https://dismod-at.readthedocs.io	smooth_grid_table
https://dismod-at.readthedocs.io	smooth_grid_table.py
https://dismod-at.readthedocs.io	smooth_table
https://dismod-at.readthedocs.io	subgroup_table
https://dismod-at.readthedocs.io	time_table
https://dismod-at.readthedocs.io	time_table.py
https://dismod-at.readthedocs.io	weight_grid_table
https://dismod-at.readthedocs.io	weight_grid_table.py
https://dismod-at.readthedocs.io	weight_table
https://dismod-at.readthedocs.io	data_flow
https://dismod-at.readthedocs.io	age_avg_table
https://dismod-at.readthedocs.io	bnd_mulcov_table
https://dismod-at.readthedocs.io	data_sim_table
https://dismod-at.readthedocs.io	data_subset_table
https://dismod-at.readthedocs.io	depend_var_table
https://dismod-at.readthedocs.io	fit_data_subset_table
https://dismod-at.readthedocs.io	fit_var_table
https://dismod-at.readthedocs.io	hes_fixed_table
https://dismod-at.readthedocs.io	hes_random_table
https://dismod-at.readthedocs.io	log_table
https://dismod-at.readthedocs.io	mixed_info_table
https://dismod-at.readthedocs.io	predict_table
https://dismod-at.readthedocs.io	prior_sim_table
https://dismod-at.readthedocs.io	sample_table
https://dismod-at.readthedocs.io	scale_var_table
https://dismod-at.readthedocs.io	start_var_table
https://dismod-at.readthedocs.io	trace_fixed_table
https://dismod-at.readthedocs.io	truth_var_table
https://dismod-at.readthedocs.io	var_table
https://dismod-at.readthedocs.io	model
https://dismod-at.readthedocs.io	model_variables
https://dismod-at.readthedocs.io	avg_integrand
https://dismod-at.readthedocs.io	data_like
https://dismod-at.readthedocs.io	variable_prior
https://dismod-at.readthedocs.io	fixed_value
https://dismod-at.readthedocs.io	random_value
https://dismod-at.readthedocs.io	smooth_dage
https://dismod-at.readthedocs.io	smooth_dtime
https://dismod-at.readthedocs.io	fixed_diff
https://dismod-at.readthedocs.io	random_diff
https://dismod-at.readthedocs.io	fixed_prior
https://dismod-at.readthedocs.io	random_prior
https://dismod-at.readthedocs.io	statistic
https://dismod-at.readthedocs.io	bilinear
https://dismod-at.readthedocs.io	posterior
https://dismod-at.readthedocs.io	prev_dep
https://dismod-at.readthedocs.io	numeric_average
https://dismod-at.readthedocs.io	command
https://dismod-at.readthedocs.io	dismodat.py
https://dismod-at.readthedocs.io	bnd_mulcov_command
https://dismod-at.readthedocs.io	data_density_command
https://dismod-at.readthedocs.io	depend_command
https://dismod-at.readthedocs.io	depend_command.py
https://dismod-at.readthedocs.io	fit_command
https://dismod-at.readthedocs.io	fit_command.py
https://dismod-at.readthedocs.io	hold_out_command
https://dismod-at.readthedocs.io	init_command
https://dismod-at.readthedocs.io	init_command.py
https://dismod-at.readthedocs.io	old2new_command
https://dismod-at.readthedocs.io	predict_command
https://dismod-at.readthedocs.io	predict_command.py
https://dismod-at.readthedocs.io	sample_command
https://dismod-at.readthedocs.io	sample_command.py
https://dismod-at.readthedocs.io	set_command
https://dismod-at.readthedocs.io	set_command.py
https://dismod-at.readthedocs.io	simulate_command
https://dismod-at.readthedocs.io	simulate_command.py
https://dismod-at.readthedocs.io	python
https://dismod-at.readthedocs.io	average_integrand
https://dismod-at.readthedocs.io	user_average_integrand.py
https://dismod-at.readthedocs.io	connection_file
https://dismod-at.readthedocs.io	user_connection_file.py
https://dismod-at.readthedocs.io	create_connection
https://dismod-at.readthedocs.io	create_database
https://dismod-at.readthedocs.io	create_database.py
https://dismod-at.readthedocs.io	create_table
https://dismod-at.readthedocs.io	create_table.py
https://dismod-at.readthedocs.io	csv2db_command
https://dismod-at.readthedocs.io	db2csv_command
https://dismod-at.readthedocs.io	db2csv_command.py
https://dismod-at.readthedocs.io	ihme_db.sh
https://dismod-at.readthedocs.io	get_name_type
https://dismod-at.readthedocs.io	get_name_type.py
https://dismod-at.readthedocs.io	get_row_list
https://dismod-at.readthedocs.io	get_row_list.py
https://dismod-at.readthedocs.io	get_table_dict
https://dismod-at.readthedocs.io	get_table_dict.py
https://dismod-at.readthedocs.io	metropolis
https://dismod-at.readthedocs.io	user_metropolis.py
https://dismod-at.readthedocs.io	modify_command
https://dismod-at.readthedocs.io	modify_command.py
https://dismod-at.readthedocs.io	perturb_command
https://dismod-at.readthedocs.io	plot_curve
https://dismod-at.readthedocs.io	plot_data_fit
https://dismod-at.readthedocs.io	plot_rate_fit
https://dismod-at.readthedocs.io	replace_table
https://dismod-at.readthedocs.io	replace_table.py
https://dismod-at.readthedocs.io	sql_command
https://dismod-at.readthedocs.io	system_command_prc
https://dismod-at.readthedocs.io	unicode_tuple
https://dismod-at.readthedocs.io	unicode_tuple.py
https://dismod-at.readthedocs.io	release_notes
https://dismod-at.readthedocs.io	whats_new_2022
https://dismod-at.readthedocs.io	whats_new_2021
https://dismod-at.readthedocs.io	whats_new_2020
https://dismod-at.readthedocs.io	whats_new_2019
https://dismod-at.readthedocs.io	whats_new_2018
https://dismod-at.readthedocs.io	whats_new_2017
https://dismod-at.readthedocs.io	whats_new_2016
https://dismod-at.readthedocs.io	whats_new_2015
https://dismod-at.readthedocs.io	wish_list
https://docs.docker.com/	dock_dismod_at.sh#Requirements
https://docs.docker.com/glossary/?term=Dockerfile	dock_dismod_at.sh#Building Images.Dockerfile
https://docs.python.org/2/library/sqlite3.html#connection-objects	create_connection#connection
https://docs.python.org/2/library/sqlite3.html	whats_new_2015#mm-dd.06-24
https://docs.python.org/3/library/	install_unix#System Requirements.python3
https://en.wikipedia.org/wiki/Censoring_(statistics)	censor_density#References
https://en.wikipedia.org/wiki/Likelihood_function	censor_density#References
https://git-scm.com/	install_unix#System Requirements.git
https://github.com/bradbell/dismod_at	dismod_at#Links
https://github.com/coin-or/Ipopt/discussions/471	run_cmake.sh#specific_compiler
https://github.com/coin-or/Ipopt/issues/393	whats_new_2020#mm-dd.08-23
https://gitlab.kitware.com/cmake/community/-/wikis/doc/cmake/RPATH-handling	install_unix#Paths.LD_LIBRARY_PATH
https://opencontainers.org/	dock_dismod_at.sh#OCI
https://podman.io	dock_dismod_at.sh#Requirements
https://projects.coin-or.org/Ipopt	install_unix#Special Requirements.ipopt
https://raw.githubusercontent.com/bradbell/dismod_at/master/bin/dock_dismod_at.sh	dock_dismod_at.sh#Purpose
https://xrst.readthedocs.io	dismod_at#Current Documentation
moby.ihme.washington.edu/bradbell/cppad_mixed/wish_list.htm	whats_new_2016#mm-dd.01-16